class: ALA-title-slide animated fadeIn <img class="logo" src="img/ALA_Logo_Stacked+Tagline_REV-RGB.png" width="40%" align="right"> <br> .main-title[<br><br><br>Mapping Australia’s biodiversity]<br> .main-subtitle[using R & the ALA]<br> <br> .white[ <b>Martin Westgate</b><br> Team Leader | Science & Decision Support | ALA<br> <br> NUMBATs seminar | Monash University | 2021-11-12 ] <br> <img class="logo" src="img/NCRIS_logo.png" width="10%" align="left"> <img class="logo" src="img/CSIRO_logo.png" width="10%" align="left"> <br> .small[The ALA is made possible by contributions from its many partners. It receives support through the Australian Government through the National Collaborative Research Infrastructure Strategy (NCRIS) and is hosted by CSIRO.] --- class: ALA-standard-slide animated fadeIn layout: true background-image: url(img/ALA_Logo_Inline_RGB.png) background-position: 90% 100% background-size: 20% --- .slide-title[Outline<br><br>] .slide-title[Identity] .slide-subtitle[&nbsp;&nbsp;who we are]<br><br> .slide-title[Past] .slide-subtitle[&nbsp;&nbsp;`ALA4R` & why we rebuilt it]<br><br> .slide-title[Present] .slide-subtitle[&nbsp;&nbsp;`galah` & why it's good]<br><br> .slide-title[Future] .slide-subtitle[&nbsp;&nbsp;R @ ALA] --- class: ALA-title-slide animated fadeIn layout: false .divider-text[<br><br><br>Identity] <br> .white[who we are] --- class: ALA-standard-slide animated fadeIn layout: true background-image: url(img/ALA_Logo_Inline_RGB.png) background-position: 90% 100% background-size: 20% --- .slide-title[Identity]&nbsp;&nbsp;.slide-subtitle[who we are] <br><br><br> .slide-title[Database] .slide-subtitle[&nbsp;&nbsp;101,466,364 biodiversity observations]<br><br> .slide-title[Network] .slide-subtitle[&nbsp;&nbsp; 816 data providers]<br><br> .slide-title[Code] .slide-subtitle[&nbsp;&nbsp; 221 GitHub repositories]<br><br> .slide-title[People] .slide-subtitle[&nbsp;&nbsp; 34 staff]<br><br> --- .slide-title[Identity]&nbsp;&nbsp;.slide-subtitle[time] <!-- --> --- .slide-title[Identity]&nbsp;&nbsp;.slide-subtitle[space] <!-- --> --- .slide-title[Identity]&nbsp;&nbsp;.slide-subtitle[taxonomy] <!-- --> --- .slide-title[Identity]&nbsp;&nbsp;.slide-subtitle[applications] <!-- --> --- class: ALA-title-slide animated fadeIn layout: false .divider-text[<br><br><br>Past] <br> .white[`ALA4R` & why we rebuilt it] --- class: ALA-standard-slide animated fadeIn layout: true background-image: url(img/ALA_Logo_Inline_RGB.png) background-position: 90% 100% background-size: 20% --- .slide-title[Past]&nbsp;&nbsp;.slide-subtitle[`ALA4R`] <br> <br> .slide-title[Benefits] .slide-subtitle[<b>groundbreaking:</b> released in 2014]<br><br> .slide-subtitle[<b>flexible:</b> return the data you want, customised in various ways]<br><br> .slide-subtitle[<b>wide-ranging:</b> any query accessible via the API can be constructed] --- .slide-title[Past]&nbsp;&nbsp;.slide-subtitle[`ALA4R`] <br> <br> .slide-title[No function naming convention] .slide-subtitle[abbreviations: `aus()`]<br><br> .slide-subtitle[snake case: `ala_fields()`]<br><br> .slide-subtitle[contractions: `fieldguide()`]<br><br> .slide-subtitle[single words: `occurrences()`, `images()`] --- .slide-title[Past]&nbsp;&nbsp;.slide-subtitle[`ALA4R`] <br> <br> .slide-title[Confusing syntax] .slide-subtitle[unclear differences between functions:<br> &nbsp;&nbsp;&nbsp;&nbsp;`ala_list()`, `ala_lists()`, `specieslist()`<br> &nbsp;&nbsp;&nbsp;&nbsp;`search_layers`, `ala_fields`] .slide-subtitle[argument names require specialist knowledge:<br> &nbsp;&nbsp;&nbsp;&nbsp;`wkt`, `fq`, `qa`] .slide-subtitle[arguments require `solr` queries passed as strings:<br> &nbsp;&nbsp;&nbsp;&nbsp;`occurrences(taxon = "taxon_name:\"Alaba vibex\"")`] --- .slide-title[Past]&nbsp;&nbsp;.slide-subtitle[`ALA4R`] <br> <br> .slide-title[Inconsistent behaviour] .slide-subtitle[most functions return a `data.frame` (good)]<br><br> .slide-subtitle[`occurrences()` returns a `list`]<br><br> .slide-subtitle[`fieldguide()` and `plot.occurrences()` output a PDF] --- class: ALA-title-slide animated fadeIn layout: false .divider-text[<br><br><br>Present] <br> .white[`galah` and why it's good] --- class: ALA-standard-slide animated fadeIn layout: true background-image: url(img/ALA_Logo_Inline_RGB.png) background-position: 90% 100% background-size: 20% --- .slide-title[Present]&nbsp;&nbsp;.slide-subtitle[galah] .pull-left[ <img class="logo" src="img/galah_logo_final_midres.png" width="90%"> ] .pull-right[ .slide-subtitle[Data] - `ala_counts()` - `ala_species()` - `ala_occurrences()` - `ala_media()` - `ala_taxonomy()` .slide-subtitle[Filter] - `select_taxa()` - `select_filters()` - `select_locations()` - `select_fields()` .slide-subtitle[Lookup] - `search_fields()` - `find_field_values()` - `find_profiles()` - `find_profile_attributes()` - `find_atlases()` ] --- .slide-title[Present]&nbsp;&nbsp;.slide-subtitle[galah] <div id="htmlwidget-f3d489b7ad7cb7e35bcf" style="width:1000px;height:500px;" class="grViz html-widget"></div> <script type="application/json" data-for="htmlwidget-f3d489b7ad7cb7e35bcf">{"x":{"diagram":"\ndigraph boxes_and_circles {\n\n # a \"graph\" statement\n graph [overlap = true, fontsize = 15, rankdir = LR]\n\n # several \"node\" statements\n node [shape = box,\n fontname = Helvetica,\n fixedsize = TRUE,\n width = 2.0,\n height = 0.5,\n fontcolor = \"#E06E53\",\n color = \"#E06E53\"]\n ala_counts; ala_species; ala_occurrences; ala_media; ala_taxonomy\n\n node [shape = box,\n fontname = Helvetica,\n fontcolor = \"#c7902a\"\n color = \"#c7902a\"]\n select_taxa; select_filters; select_locations; select_fields\n \n node [shape = box,\n fontname = Helvetica,\n fontcolor = \"#7f9959\",\n color = \"#7f9959\"]\n find_profiles; find_ranks; search_fields; find_field_values; find_profile_attributes\n \n node [shape = circle,\n fixedsize = true,\n fontcolor = \"grey30\",\n color = \"grey30\",\n width = 0.9]\n taxa; filters; locations; group_by; fields; profile; down_to; \"...\"\n \n edge [ color = \"grey50\" , dir = \"none\"]\n ala_counts->taxa\n ala_counts->filters\n ala_counts->locations\n ala_counts->group_by\n ala_species->taxa\n ala_species->filters\n ala_species->locations\n ala_media->taxa\n ala_media->filters\n ala_media->locations\n ala_media->fields\n ala_occurrences->taxa \n ala_occurrences->filters\n ala_occurrences->locations\n ala_occurrences->fields\n ala_taxonomy->taxa\n ala_taxonomy->down_to\n taxa->select_taxa \n filters->select_filters \n locations->select_locations\n group_by->select_fields\n fields->select_fields\n select_filters->\"...\"\n select_filters->profile\n select_fields->\"...\"\n search_fields->find_field_values\n \"...\"->search_fields\n \"...\"->find_field_values\n profile->find_profiles->find_profile_attributes\n down_to->find_ranks \n \n}\n","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script> --- .slide-title[Present]&nbsp;&nbsp;.slide-subtitle[`galah::`] <div style="margin-top:-70px; margin-left:500px;"> <div id="htmlwidget-47dfa2b948c88ec64351" style="width:600px;height:250px;" class="grViz html-widget"></div> <script type="application/json" data-for="htmlwidget-47dfa2b948c88ec64351">{"x":{"diagram":"\ndigraph boxes_and_circles {\n\n # a \"graph\" statement\n graph [overlap = true, fontsize = 15, rankdir = LR]\n\n # several \"node\" statements\n node [shape = box,\n fontname = Helvetica,\n fixedsize = TRUE,\n width = 2.0,\n height = 0.5]\n ala_counts [fontcolor = \"grey50\", color = \"grey50\"]\n ala_species [fontcolor = \"grey50\", color = \"grey50\"]\n 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\"grey50\"]\n taxa->select_taxa [color = \"grey50\"]\n filters->select_filters [color = \"grey50\"]\n locations->select_locations [color = \"grey50\"]\n group_by->select_fields [color = \"grey50\"]\n fields->select_fields [color = \"grey50\"]\n select_filters->\"...\" [color = \"grey50\"]\n select_filters->profile [color = \"grey50\"]\n select_fields->\"...\" [color = \"grey50\"]\n search_fields->find_field_values [color = \"grey50\"]\n \"...\"->search_fields [color = \"grey50\"]\n \"...\"->find_field_values [color = \"grey50\"]\n profile->find_profiles->find_profile_attributes [color = \"grey50\"]\n down_to->find_ranks [color = \"grey50\"]\n \n}\n","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script> </div> --- .slide-title[Present]&nbsp;&nbsp;.slide-subtitle[`galah::select_taxa`] <div style="margin-top:-70px; margin-left:500px;"> <div id="htmlwidget-c50a6d1055bc5a1ebb0a" style="width:600px;height:250px;" class="grViz html-widget"></div> <script 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profile->find_profiles->find_profile_attributes [color = \"grey50\"]\n down_to->find_ranks [color = \"grey50\"]\n \n}\n","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script> </div> ```r select_taxa("Mammalia") ``` ``` ## search_term scientific_name taxon_concept_id rank match_type kingdom phylum class ## 1 Mammalia MAMMALIA urn:lsid:biodiversity.org.au:afd.taxon:e9e7db31-04df-41fb-bd8d-e0b0f3c332d6 class exactMatch Animalia Chordata Mammalia ## vernacular_name issues ## 1 Mammals noIssue ``` --- .slide-title[Present]&nbsp;&nbsp;.slide-subtitle[`galah::select_taxa`] <div style="margin-top:-70px; margin-left:500px;"> <div id="htmlwidget-e5724c7c28b0e12294c7" style="width:600px;height:250px;" class="grViz html-widget"></div> <script type="application/json" data-for="htmlwidget-e5724c7c28b0e12294c7">{"x":{"diagram":"\ndigraph boxes_and_circles {\n\n # a \"graph\" statement\n graph [overlap = true, fontsize = 15, rankdir = LR]\n\n # several \"node\" statements\n node 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width = 0.9]\n taxa [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n filters [fontcolor = \"grey50\", color = \"grey50\"]\n locations [fontcolor = \"grey50\", color = \"grey50\"]\n group_by [fontcolor = \"grey50\", color = \"grey50\"]\n fields [fontcolor = \"grey50\", color = \"grey50\"]\n profile [fontcolor = \"grey50\", color = \"grey50\"]\n down_to [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n \"...\" [fontcolor = \"grey50\", color = \"grey50\"]\n \n edge [dir = \"none\"]\n ala_counts->taxa [color = \"grey50\"]\n ala_counts->filters [color = \"grey50\"]\n ala_counts->locations [color = \"grey50\"]\n ala_counts->group_by [color = \"grey50\"]\n ala_species->taxa [color = \"grey50\"]\n ala_species->filters [color = \"grey50\"]\n ala_species->locations [color = \"grey50\"]\n ala_media->taxa [color = \"grey50\"]\n ala_media->filters [color = \"grey50\"]\n ala_media->locations [color = \"grey50\"]\n ala_media->fields [color = \"grey50\"]\n ala_occurrences->taxa [color = \"grey50\"]\n ala_occurrences->filters [color = \"grey50\"]\n ala_occurrences->locations [color = \"grey50\"]\n ala_occurrences->fields [color = \"grey50\"]\n ala_taxonomy->taxa [color = \"#E06E53\"]\n ala_taxonomy->down_to [color = \"#E06E53\"]\n taxa->select_taxa [color = \"#E06E53\"]\n filters->select_filters [color = \"grey50\"]\n locations->select_locations [color = \"grey50\"]\n group_by->select_fields [color = \"grey50\"]\n fields->select_fields [color = \"grey50\"]\n select_filters->\"...\" [color = \"grey50\"]\n select_filters->profile [color = \"grey50\"]\n select_fields->\"...\" [color = \"grey50\"]\n search_fields->find_field_values [color = \"grey50\"]\n \"...\"->search_fields [color = \"grey50\"]\n \"...\"->find_field_values [color = \"grey50\"]\n profile->find_profiles->find_profile_attributes [color = \"grey50\"]\n down_to->find_ranks [color = \"grey50\"]\n \n}\n","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script> </div> ```r family_tree <- ala_taxonomy(taxa = select_taxa("Mammalia"), down_to = "family") data.tree::ToDataFrameTypeCol(family_tree, type = "rank")[1:5, ] ``` ``` ## rank_class rank_subclass rank_order rank_suborder rank_family ## 1 Mammalia Eutheria Artiodactyla Ruminata Bovidae ## 2 Mammalia Eutheria Artiodactyla Ruminata Cervidae ## 3 Mammalia Eutheria Artiodactyla Suina Suidae ## 4 Mammalia Eutheria Artiodactyla Tylopoda Camelidae ## 5 Mammalia Eutheria Carnivora <NA> Canidae ``` --- .slide-title[Present]&nbsp;&nbsp;.slide-subtitle[`galah::select_taxa`] <div style="margin-top:-70px; margin-left:500px;"> <div id="htmlwidget-943bbc69c2d025c44d85" style="width:600px;height:250px;" class="grViz html-widget"></div> <script type="application/json" data-for="htmlwidget-943bbc69c2d025c44d85">{"x":{"diagram":"\ndigraph boxes_and_circles {\n\n # a \"graph\" statement\n graph [overlap = true, fontsize = 15, rankdir = LR]\n\n # several \"node\" statements\n node [shape = box,\n fontname = Helvetica,\n fixedsize = TRUE,\n width = 2.0,\n 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[color = \"grey50\"]\n ala_occurrences->fields [color = \"grey50\"]\n ala_taxonomy->taxa [color = \"grey50\"]\n ala_taxonomy->down_to [color = \"grey50\"]\n taxa->select_taxa [color = \"#E06E53\"]\n filters->select_filters [color = \"grey50\"]\n locations->select_locations [color = \"grey50\"]\n group_by->select_fields [color = \"grey50\"]\n fields->select_fields [color = \"grey50\"]\n select_filters->\"...\" [color = \"grey50\"]\n select_filters->profile [color = \"grey50\"]\n select_fields->\"...\" [color = \"grey50\"]\n search_fields->find_field_values [color = \"grey50\"]\n \"...\"->search_fields [color = \"grey50\"]\n \"...\"->find_field_values [color = \"grey50\"]\n profile->find_profiles->find_profile_attributes [color = \"grey50\"]\n down_to->find_ranks [color = \"grey50\"]\n \n}\n","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script> </div> ```r ala_species(taxa = select_taxa("Lagomorpha")) ``` ``` ## kingdom phylum class order family genus species author ## 1 Animalia Chordata Mammalia Lagomorpha Leporidae Oryctolagus Oryctolagus cuniculus (Linnaeus, 1758) ## 2 Animalia Chordata Mammalia Lagomorpha Leporidae Lepus Lepus capensis Linnaeus, 1758 ## 3 Animalia Chordata Mammalia Lagomorpha Leporidae Lepus Lepus europaeus ## species_guid vernacular_name ## 1 urn:lsid:biodiversity.org.au:afd.taxon:692effa3-b719-495f-a86f-ce89e2981652 Rabbit ## 2 urn:lsid:biodiversity.org.au:afd.taxon:6240deca-2f4f-4bcd-a944-c49df0ae83b5 Brown Hare ## 3 NZOR-6-55337 ``` --- .slide-title[Present]&nbsp;&nbsp;.slide-subtitle[`galah::select_taxa`] <div style="margin-top:-70px; margin-left:500px;"> <div id="htmlwidget-ca11cb19ce6a753ac11f" style="width:600px;height:250px;" class="grViz html-widget"></div> <script type="application/json" data-for="htmlwidget-ca11cb19ce6a753ac11f">{"x":{"diagram":"\ndigraph boxes_and_circles {\n\n # a \"graph\" statement\n graph [overlap = true, fontsize = 15, rankdir = LR]\n\n # several \"node\" statements\n node [shape = box,\n fontname = Helvetica,\n fixedsize = TRUE,\n width = 2.0,\n height = 0.5]\n ala_counts [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n ala_species [fontcolor = \"grey50\", color = \"grey50\"]\n ala_occurrences [fontcolor = \"grey50\", color = \"grey50\"]\n ala_media [fontcolor = \"grey50\", color = \"grey50\"]\n ala_taxonomy [fontcolor = \"grey50\", color = \"grey50\"]\n select_taxa [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n select_filters [fontcolor = \"grey50\", color = \"grey50\"]\n select_locations [fontcolor = \"grey50\", color = \"grey50\"]\n select_fields [fontcolor = \"grey50\", color = \"grey50\"]\n find_profiles [fontcolor = \"grey50\", color = \"grey50\"]\n find_ranks [fontcolor = \"grey50\", color = \"grey50\"]\n search_fields [fontcolor = \"grey50\", color = \"grey50\"]\n find_field_values [fontcolor = \"grey50\", color = \"grey50\"]\n find_profile_attributes [fontcolor = \"grey50\", color = \"grey50\"]\n \n node [shape = circle, fixedsize = true, width = 0.9]\n taxa [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n filters [fontcolor = \"grey50\", color = \"grey50\"]\n locations [fontcolor = \"grey50\", color = \"grey50\"]\n group_by [fontcolor = \"grey50\", color = \"grey50\"]\n fields [fontcolor = \"grey50\", color = \"grey50\"]\n profile [fontcolor = \"grey50\", color = \"grey50\"]\n down_to [fontcolor = \"grey50\", color = \"grey50\"]\n \"...\" [fontcolor = \"grey50\", color = \"grey50\"]\n \n edge [dir = \"none\"]\n ala_counts->taxa [color = \"#E06E53\"]\n ala_counts->filters [color = \"grey50\"]\n ala_counts->locations [color = \"grey50\"]\n ala_counts->group_by [color = \"grey50\"]\n ala_species->taxa [color = \"grey50\"]\n ala_species->filters [color = \"grey50\"]\n ala_species->locations [color = \"grey50\"]\n ala_media->taxa [color = \"grey50\"]\n ala_media->filters [color = \"grey50\"]\n ala_media->locations [color = \"grey50\"]\n ala_media->fields [color = \"grey50\"]\n ala_occurrences->taxa [color = \"grey50\"]\n ala_occurrences->filters [color = \"grey50\"]\n ala_occurrences->locations [color = \"grey50\"]\n ala_occurrences->fields [color = \"grey50\"]\n ala_taxonomy->taxa [color = \"grey50\"]\n ala_taxonomy->down_to [color = \"grey50\"]\n taxa->select_taxa [color = \"#E06E53\"]\n filters->select_filters [color = \"grey50\"]\n locations->select_locations [color = \"grey50\"]\n group_by->select_fields [color = \"grey50\"]\n fields->select_fields [color = \"grey50\"]\n select_filters->\"...\" [color = \"grey50\"]\n select_filters->profile [color = \"grey50\"]\n select_fields->\"...\" [color = \"grey50\"]\n search_fields->find_field_values [color = \"grey50\"]\n \"...\"->search_fields [color = \"grey50\"]\n \"...\"->find_field_values [color = \"grey50\"]\n profile->find_profiles->find_profile_attributes [color = \"grey50\"]\n down_to->find_ranks [color = \"grey50\"]\n \n}\n","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script> </div> ```r ala_counts(select_taxa("Lepus capensis")) ``` ``` ## [1] 6865 ``` --- .slide-title[Present]&nbsp;&nbsp;.slide-subtitle[`galah::select_taxa`] <div style="margin-top:-70px; margin-left:500px;"> <div id="htmlwidget-2bce1a4e51694e23dd81" style="width:600px;height:250px;" class="grViz html-widget"></div> <script type="application/json" data-for="htmlwidget-2bce1a4e51694e23dd81">{"x":{"diagram":"\ndigraph boxes_and_circles {\n\n # a \"graph\" statement\n graph [overlap = true, fontsize = 15, rankdir = LR]\n\n # several \"node\" statements\n node [shape = box,\n fontname = Helvetica,\n fixedsize = TRUE,\n width = 2.0,\n height = 0.5]\n ala_counts [fontcolor = \"grey50\", color = \"grey50\"]\n ala_species [fontcolor = \"grey50\", color = \"grey50\"]\n ala_occurrences [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n ala_media [fontcolor = \"grey50\", color = \"grey50\"]\n ala_taxonomy [fontcolor = \"grey50\", color = \"grey50\"]\n select_taxa [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n select_filters [fontcolor = 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ala_counts->taxa [color = \"grey50\"]\n ala_counts->filters [color = \"grey50\"]\n ala_counts->locations [color = \"grey50\"]\n ala_counts->group_by [color = \"grey50\"]\n ala_species->taxa [color = \"grey50\"]\n ala_species->filters [color = \"grey50\"]\n ala_species->locations [color = \"grey50\"]\n ala_media->taxa [color = \"grey50\"]\n ala_media->filters [color = \"grey50\"]\n ala_media->locations [color = \"grey50\"]\n ala_media->fields [color = \"grey50\"]\n ala_occurrences->taxa [color = \"#E06E53\"]\n ala_occurrences->filters [color = \"grey50\"]\n ala_occurrences->locations [color = \"grey50\"]\n ala_occurrences->fields [color = \"grey50\"]\n ala_taxonomy->taxa [color = \"grey50\"]\n ala_taxonomy->down_to [color = \"grey50\"]\n taxa->select_taxa [color = \"#E06E53\"]\n filters->select_filters [color = \"grey50\"]\n locations->select_locations [color = \"grey50\"]\n group_by->select_fields [color = \"grey50\"]\n fields->select_fields [color = \"grey50\"]\n select_filters->\"...\" [color = \"grey50\"]\n select_filters->profile [color = \"grey50\"]\n select_fields->\"...\" [color = \"grey50\"]\n search_fields->find_field_values [color = \"grey50\"]\n \"...\"->search_fields [color = \"grey50\"]\n \"...\"->find_field_values [color = \"grey50\"]\n profile->find_profiles->find_profile_attributes [color = \"grey50\"]\n down_to->find_ranks [color = \"grey50\"]\n \n}\n","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script> </div> ```r ala_occurrences(select_taxa("Lepus capensis"))[1:3, ] ``` ``` ## decimalLatitude decimalLongitude eventDate scientificName taxonConceptID ## 1 -43.14459 147.8438 Lepus capensis urn:lsid:biodiversity.org.au:afd.taxon:6240deca-2f4f-4bcd-a944-c49df0ae83b5 ## 2 -42.96385 147.4906 Lepus capensis urn:lsid:biodiversity.org.au:afd.taxon:6240deca-2f4f-4bcd-a944-c49df0ae83b5 ## 3 -42.88732 147.8060 Lepus capensis urn:lsid:biodiversity.org.au:afd.taxon:6240deca-2f4f-4bcd-a944-c49df0ae83b5 ## recordID dataResourceName ## 1 5055c021-9e12-4529-a21a-3bfd2fe7eabd Tasmanian Natural Values Atlas ## 2 949263b7-4efe-4a0d-8271-c56a9bb0a8a3 Tasmanian Natural Values Atlas ## 3 329c8355-c6f9-4f72-844c-0e6f02ad3a34 Tasmanian Natural Values Atlas ``` --- .slide-title[Present]&nbsp;&nbsp;.slide-subtitle[`galah::select_filters`] <div style="margin-top:-70px; margin-left:500px;"> <div id="htmlwidget-54cb957f2a86c23dd67f" style="width:600px;height:250px;" class="grViz html-widget"></div> <script type="application/json" data-for="htmlwidget-54cb957f2a86c23dd67f">{"x":{"diagram":"\ndigraph boxes_and_circles {\n\n # a \"graph\" statement\n graph [overlap = true, fontsize = 15, rankdir = LR]\n\n # several \"node\" statements\n node [shape = box,\n fontname = Helvetica,\n fixedsize = TRUE,\n width = 2.0,\n height = 0.5]\n ala_counts [fontcolor = \"grey50\", color = \"grey50\"]\n ala_species [fontcolor = \"grey50\", color = \"grey50\"]\n ala_occurrences [fontcolor = \"grey50\", color = \"grey50\"]\n 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\"grey50\"]\n profile [fontcolor = \"grey50\", color = \"grey50\"]\n down_to [fontcolor = \"grey50\", color = \"grey50\"]\n \"...\" [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n \n edge [dir = \"none\"]\n ala_counts->taxa [color = \"grey50\"]\n ala_counts->filters [color = \"grey50\"]\n ala_counts->locations [color = \"grey50\"]\n ala_counts->group_by [color = \"grey50\"]\n ala_species->taxa [color = \"grey50\"]\n ala_species->filters [color = \"grey50\"]\n ala_species->locations [color = \"grey50\"]\n ala_media->taxa [color = \"grey50\"]\n ala_media->filters [color = \"grey50\"]\n ala_media->locations [color = \"grey50\"]\n ala_media->fields [color = \"grey50\"]\n ala_occurrences->taxa [color = \"grey50\"]\n ala_occurrences->filters [color = \"grey50\"]\n ala_occurrences->locations [color = \"grey50\"]\n ala_occurrences->fields [color = \"grey50\"]\n ala_taxonomy->taxa [color = \"grey50\"]\n ala_taxonomy->down_to [color = \"grey50\"]\n taxa->select_taxa [color = \"grey50\"]\n filters->select_filters [color = \"grey50\"]\n locations->select_locations [color = \"grey50\"]\n group_by->select_fields [color = \"grey50\"]\n fields->select_fields [color = \"grey50\"]\n select_filters->\"...\" [color = \"#E06E53\"]\n select_filters->profile [color = \"grey50\"]\n select_fields->\"...\" [color = \"grey50\"]\n search_fields->find_field_values [color = \"grey50\"]\n \"...\"->search_fields [color = \"grey50\"]\n \"...\"->find_field_values [color = \"grey50\"]\n profile->find_profiles->find_profile_attributes [color = \"grey50\"]\n down_to->find_ranks [color = \"grey50\"]\n \n}\n","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script> </div> ```r select_filters(year >= 2015) ``` ``` ## variable logical value query ## 1 year >= 2015 year:[2015 TO *] ``` --- .slide-title[Present]&nbsp;&nbsp;.slide-subtitle[`galah::select_filters`] <div style="margin-top:-70px; margin-left:500px;"> <div id="htmlwidget-2e29322a0864d1f1470d" style="width:600px;height:250px;" class="grViz html-widget"></div> <script type="application/json" data-for="htmlwidget-2e29322a0864d1f1470d">{"x":{"diagram":"\ndigraph boxes_and_circles {\n\n # a \"graph\" statement\n graph [overlap = true, fontsize = 15, rankdir = LR]\n\n # several \"node\" statements\n node [shape = box,\n fontname = Helvetica,\n fixedsize = TRUE,\n width = 2.0,\n height = 0.5]\n ala_counts [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n ala_species [fontcolor = \"grey50\", color = \"grey50\"]\n ala_occurrences [fontcolor = \"grey50\", color = \"grey50\"]\n ala_media [fontcolor = \"grey50\", color = \"grey50\"]\n ala_taxonomy [fontcolor = \"grey50\", color = \"grey50\"]\n select_taxa [fontcolor = \"grey50\", color = \"grey50\"]\n select_filters [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n select_locations [fontcolor = \"grey50\", color = \"grey50\"]\n select_fields [fontcolor = \"grey50\", color = \"grey50\"]\n find_profiles [fontcolor = \"grey50\", color = \"grey50\"]\n find_ranks [fontcolor = \"grey50\", color = \"grey50\"]\n search_fields [fontcolor = \"grey50\", color = \"grey50\"]\n find_field_values [fontcolor = \"grey50\", color = \"grey50\"]\n find_profile_attributes [fontcolor = \"grey50\", color = \"grey50\"]\n \n node [shape = circle, fixedsize = true, width = 0.9]\n taxa [fontcolor = \"grey50\", color = \"grey50\"]\n filters [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n locations [fontcolor = \"grey50\", color = \"grey50\"]\n group_by [fontcolor = \"grey50\", color = \"grey50\"]\n fields [fontcolor = \"grey50\", color = \"grey50\"]\n profile [fontcolor = \"grey50\", color = \"grey50\"]\n down_to [fontcolor = \"grey50\", color = \"grey50\"]\n \"...\" [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n \n edge [dir = \"none\"]\n ala_counts->taxa [color = \"grey50\"]\n ala_counts->filters [color = \"#E06E53\"]\n ala_counts->locations [color = \"grey50\"]\n ala_counts->group_by [color = \"grey50\"]\n ala_species->taxa [color = \"grey50\"]\n ala_species->filters [color = \"grey50\"]\n ala_species->locations [color = \"grey50\"]\n ala_media->taxa [color = \"grey50\"]\n ala_media->filters [color = \"grey50\"]\n ala_media->locations [color = \"grey50\"]\n ala_media->fields [color = \"grey50\"]\n ala_occurrences->taxa [color = \"grey50\"]\n ala_occurrences->filters [color = \"grey50\"]\n ala_occurrences->locations [color = \"grey50\"]\n ala_occurrences->fields [color = \"grey50\"]\n ala_taxonomy->taxa [color = \"grey50\"]\n ala_taxonomy->down_to [color = \"grey50\"]\n taxa->select_taxa [color = \"grey50\"]\n filters->select_filters [color = \"#E06E53\"]\n locations->select_locations [color = \"grey50\"]\n group_by->select_fields [color = \"grey50\"]\n fields->select_fields [color = \"grey50\"]\n select_filters->\"...\" [color = \"#E06E53\"]\n select_filters->profile [color = \"grey50\"]\n select_fields->\"...\" [color = \"grey50\"]\n search_fields->find_field_values [color = \"grey50\"]\n \"...\"->search_fields [color = \"grey50\"]\n \"...\"->find_field_values [color = \"grey50\"]\n profile->find_profiles->find_profile_attributes [color = \"grey50\"]\n down_to->find_ranks [color = \"grey50\"]\n \n}\n","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script> </div> ```r ala_counts(filters = select_filters(year >= 2015)) ``` ``` ## [1] 29674333 ``` --- .slide-title[Present]&nbsp;&nbsp;.slide-subtitle[`galah::select_filters`] <div style="margin-top:-70px; margin-left:500px;"> <div id="htmlwidget-a3bc4de2d753d8d82e51" style="width:600px;height:250px;" class="grViz html-widget"></div> <script type="application/json" data-for="htmlwidget-a3bc4de2d753d8d82e51">{"x":{"diagram":"\ndigraph boxes_and_circles {\n\n # a \"graph\" statement\n graph [overlap = true, fontsize = 15, rankdir = LR]\n\n # several \"node\" statements\n node [shape = box,\n fontname = Helvetica,\n fixedsize = TRUE,\n width = 2.0,\n height = 0.5]\n ala_counts [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n 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\"grey50\", color = \"grey50\"]\n group_by [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n fields [fontcolor = \"grey50\", color = \"grey50\"]\n profile [fontcolor = \"grey50\", color = \"grey50\"]\n down_to [fontcolor = \"grey50\", color = \"grey50\"]\n \"...\" [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n \n edge [dir = \"none\"]\n ala_counts->taxa [color = \"grey50\"]\n ala_counts->filters [color = \"#E06E53\"]\n ala_counts->locations [color = \"grey50\"]\n ala_counts->group_by [color = \"#E06E53\"]\n ala_species->taxa [color = \"grey50\"]\n ala_species->filters [color = \"grey50\"]\n ala_species->locations [color = \"grey50\"]\n ala_media->taxa [color = \"grey50\"]\n ala_media->filters [color = \"grey50\"]\n ala_media->locations [color = \"grey50\"]\n ala_media->fields [color = \"grey50\"]\n ala_occurrences->taxa [color = \"grey50\"]\n ala_occurrences->filters [color = \"grey50\"]\n ala_occurrences->locations [color = \"grey50\"]\n ala_occurrences->fields [color = \"grey50\"]\n ala_taxonomy->taxa [color = \"grey50\"]\n ala_taxonomy->down_to [color = \"grey50\"]\n taxa->select_taxa [color = \"grey50\"]\n filters->select_filters [color = \"#E06E53\"]\n locations->select_locations [color = \"grey50\"]\n group_by->select_fields [color = \"grey50\"]\n fields->select_fields [color = \"grey50\"]\n select_filters->\"...\" [color = \"#E06E53\"]\n select_filters->profile [color = \"grey50\"]\n select_fields->\"...\" [color = \"grey50\"]\n search_fields->find_field_values [color = \"grey50\"]\n \"...\"->search_fields [color = \"grey50\"]\n \"...\"->find_field_values [color = \"grey50\"]\n profile->find_profiles->find_profile_attributes [color = \"grey50\"]\n down_to->find_ranks [color = \"grey50\"]\n \n}\n","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script> </div> ```r ala_counts(filters = select_filters(year >= 2015), group_by = "year") ``` ``` ## year count ## 1 2020 5808847 ## 2 2019 5480926 ## 3 2018 5406941 ## 4 2017 4637731 ## 5 2016 3839612 ## 6 2015 3597915 ## 7 2021 902361 ``` --- .slide-title[Present]&nbsp;&nbsp;.slide-subtitle[`galah::select_filters`] <div style="margin-top:-70px; margin-left:500px;"> <div id="htmlwidget-30edd87af4801d9c474c" style="width:600px;height:250px;" class="grViz html-widget"></div> <script type="application/json" data-for="htmlwidget-30edd87af4801d9c474c">{"x":{"diagram":"\ndigraph boxes_and_circles {\n\n # a \"graph\" statement\n graph [overlap = true, fontsize = 15, rankdir = LR]\n\n # several \"node\" statements\n node [shape = box,\n fontname = Helvetica,\n fixedsize = TRUE,\n width = 2.0,\n height = 0.5]\n ala_counts [fontcolor = \"grey50\", color = \"grey50\"]\n ala_species [fontcolor = \"grey50\", color = \"grey50\"]\n ala_occurrences [fontcolor = \"grey50\", color = \"grey50\"]\n ala_media [fontcolor = \"grey50\", color = \"grey50\"]\n ala_taxonomy [fontcolor = \"grey50\", color = \"grey50\"]\n select_taxa [fontcolor = \"grey50\", color = \"grey50\"]\n select_filters [fontcolor = \"grey50\", color = \"grey50\"]\n select_locations [fontcolor = \"grey50\", color = \"grey50\"]\n select_fields [fontcolor = \"grey50\", color = \"grey50\"]\n find_profiles [fontcolor = \"grey50\", color = \"grey50\"]\n find_ranks [fontcolor = \"grey50\", color = \"grey50\"]\n search_fields [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n find_field_values [fontcolor = \"grey50\", color = \"grey50\"]\n find_profile_attributes [fontcolor = \"grey50\", color = \"grey50\"]\n \n node [shape = circle, fixedsize = true, width = 0.9]\n taxa [fontcolor = \"grey50\", color = \"grey50\"]\n filters [fontcolor = \"grey50\", color = \"grey50\"]\n locations [fontcolor = \"grey50\", color = \"grey50\"]\n group_by [fontcolor = \"grey50\", color = \"grey50\"]\n fields [fontcolor = \"grey50\", color = \"grey50\"]\n profile [fontcolor = \"grey50\", color = \"grey50\"]\n down_to [fontcolor = \"grey50\", color = \"grey50\"]\n \"...\" [fontcolor = \"grey50\", color = \"grey50\"]\n \n edge [dir = \"none\"]\n ala_counts->taxa [color = \"grey50\"]\n ala_counts->filters [color = \"grey50\"]\n ala_counts->locations [color = \"grey50\"]\n ala_counts->group_by [color = \"grey50\"]\n ala_species->taxa [color = \"grey50\"]\n ala_species->filters [color = \"grey50\"]\n ala_species->locations [color = \"grey50\"]\n ala_media->taxa [color = \"grey50\"]\n ala_media->filters [color = \"grey50\"]\n ala_media->locations [color = \"grey50\"]\n ala_media->fields [color = \"grey50\"]\n ala_occurrences->taxa [color = \"grey50\"]\n ala_occurrences->filters [color = \"grey50\"]\n ala_occurrences->locations [color = \"grey50\"]\n ala_occurrences->fields [color = \"grey50\"]\n ala_taxonomy->taxa [color = \"grey50\"]\n ala_taxonomy->down_to [color = \"grey50\"]\n taxa->select_taxa [color = \"grey50\"]\n filters->select_filters [color = \"grey50\"]\n locations->select_locations [color = \"grey50\"]\n group_by->select_fields [color = \"grey50\"]\n fields->select_fields [color = \"grey50\"]\n select_filters->\"...\" [color = \"grey50\"]\n select_filters->profile [color = \"grey50\"]\n select_fields->\"...\" [color = \"grey50\"]\n search_fields->find_field_values [color = \"grey50\"]\n \"...\"->search_fields [color = \"grey50\"]\n \"...\"->find_field_values [color = \"grey50\"]\n profile->find_profiles->find_profile_attributes [color = \"grey50\"]\n down_to->find_ranks [color = \"grey50\"]\n \n}\n","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script> </div> ```r nrow(search_fields()) ``` ``` ## [1] 794 ``` ```r search_fields("Australian states and territories") ``` ``` ## id description type ## 531 cl2013 ASGS Australian States and Territories Australian Statistical Geography Standard Australian States and Territories layers ## 610 cl22 Australian States and Territories Australian States and Territories layers ## link ## 531 http://abs.gov.au/AUSSTATS/abs@.nsf/DetailsPage/1270.0.55.001July%202011?OpenDocument ## 610 http://www.anzlic.org.au/infrastructure_GEN.html ``` --- .slide-title[Present]&nbsp;&nbsp;.slide-subtitle[`galah::select_filters`] <div style="margin-top:-70px; margin-left:500px;"> <div id="htmlwidget-d99e303df73f33215d76" style="width:600px;height:250px;" class="grViz html-widget"></div> <script type="application/json" data-for="htmlwidget-d99e303df73f33215d76">{"x":{"diagram":"\ndigraph boxes_and_circles {\n\n # a \"graph\" statement\n graph [overlap = true, fontsize = 15, rankdir = LR]\n\n # several \"node\" statements\n node [shape = box,\n fontname = Helvetica,\n fixedsize = TRUE,\n width = 2.0,\n height = 0.5]\n ala_counts [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n ala_species [fontcolor = \"grey50\", color = \"grey50\"]\n ala_occurrences [fontcolor = \"grey50\", color = \"grey50\"]\n ala_media [fontcolor = \"grey50\", color = \"grey50\"]\n ala_taxonomy [fontcolor = \"grey50\", color = \"grey50\"]\n select_taxa [fontcolor = \"grey50\", color = \"grey50\"]\n select_filters [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n select_locations [fontcolor = \"grey50\", color = \"grey50\"]\n select_fields [fontcolor = \"grey50\", color = \"grey50\"]\n find_profiles [fontcolor = \"grey50\", color = \"grey50\"]\n find_ranks [fontcolor = \"grey50\", color = \"grey50\"]\n search_fields [fontcolor = \"grey50\", color = \"grey50\"]\n find_field_values [fontcolor = \"grey50\", color = \"grey50\"]\n find_profile_attributes [fontcolor = \"grey50\", color = \"grey50\"]\n \n node [shape = circle, fixedsize = true, width = 0.9]\n taxa [fontcolor = \"grey50\", color = \"grey50\"]\n filters [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n locations [fontcolor = \"grey50\", color = \"grey50\"]\n group_by [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n fields [fontcolor = \"grey50\", color = \"grey50\"]\n profile [fontcolor = \"grey50\", color = \"grey50\"]\n down_to [fontcolor = \"grey50\", color = \"grey50\"]\n \"...\" [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n \n edge [dir = \"none\"]\n ala_counts->taxa [color = \"grey50\"]\n ala_counts->filters [color = \"#E06E53\"]\n ala_counts->locations [color = \"grey50\"]\n ala_counts->group_by [color = \"#E06E53\"]\n ala_species->taxa [color = \"grey50\"]\n ala_species->filters [color = \"grey50\"]\n ala_species->locations [color = \"grey50\"]\n ala_media->taxa [color = \"grey50\"]\n ala_media->filters [color = \"grey50\"]\n ala_media->locations [color = \"grey50\"]\n ala_media->fields [color = \"grey50\"]\n ala_occurrences->taxa [color = \"grey50\"]\n ala_occurrences->filters [color = \"grey50\"]\n ala_occurrences->locations [color = \"grey50\"]\n ala_occurrences->fields [color = \"grey50\"]\n ala_taxonomy->taxa [color = \"grey50\"]\n ala_taxonomy->down_to [color = \"grey50\"]\n taxa->select_taxa [color = \"grey50\"]\n filters->select_filters [color = \"#E06E53\"]\n locations->select_locations [color = \"grey50\"]\n group_by->select_fields [color = \"grey50\"]\n fields->select_fields [color = \"grey50\"]\n select_filters->\"...\" [color = \"#E06E53\"]\n select_filters->profile [color = \"grey50\"]\n select_fields->\"...\" [color = \"grey50\"]\n search_fields->find_field_values [color = \"grey50\"]\n \"...\"->search_fields [color = \"grey50\"]\n \"...\"->find_field_values [color = \"grey50\"]\n profile->find_profiles->find_profile_attributes [color = \"grey50\"]\n down_to->find_ranks [color = \"grey50\"]\n \n}\n","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script> </div> ```r ala_counts(filters = select_filters(year >= 2015), group_by = "cl22") %>% filter(count > 10^4) %>% ggplot(aes(x = cl22, y = count)) + geom_bar(stat = "identity") + coord_flip() + theme_bw() ``` <!-- --> --- .slide-title[Present]&nbsp;&nbsp;.slide-subtitle[`galah::select_filters`] <div style="margin-top:-70px; margin-left:500px;"> <div id="htmlwidget-751dca29fdf462c2e904" style="width:600px;height:250px;" class="grViz html-widget"></div> <script type="application/json" data-for="htmlwidget-751dca29fdf462c2e904">{"x":{"diagram":"\ndigraph boxes_and_circles {\n\n # a \"graph\" statement\n graph [overlap = true, fontsize = 15, rankdir = LR]\n\n # several \"node\" statements\n node [shape = box,\n fontname = Helvetica,\n fixedsize = TRUE,\n width = 2.0,\n height = 0.5]\n ala_counts [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n ala_species [fontcolor = \"grey50\", color = \"grey50\"]\n ala_occurrences [fontcolor = \"grey50\", color = \"grey50\"]\n ala_media [fontcolor = \"grey50\", color = \"grey50\"]\n ala_taxonomy [fontcolor = \"grey50\", color = \"grey50\"]\n select_taxa [fontcolor = \"grey50\", color = \"grey50\"]\n select_filters [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n select_locations [fontcolor = \"grey50\", color = \"grey50\"]\n select_fields [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n find_profiles [fontcolor = \"grey50\", color = \"grey50\"]\n find_ranks [fontcolor = \"grey50\", color = \"grey50\"]\n search_fields [fontcolor = \"grey50\", color = \"grey50\"]\n find_field_values [fontcolor = \"grey50\", color = \"grey50\"]\n find_profile_attributes [fontcolor = \"grey50\", color = \"grey50\"]\n \n node [shape = circle, fixedsize = true, width = 0.9]\n taxa [fontcolor = \"grey50\", color = \"grey50\"]\n filters [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n locations [fontcolor = \"grey50\", color = \"grey50\"]\n group_by [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n fields [fontcolor = \"grey50\", color = \"grey50\"]\n profile [fontcolor = \"grey50\", color = \"grey50\"]\n down_to [fontcolor = \"grey50\", color = \"grey50\"]\n \"...\" [fontcolor = \"#E06E53\", color = \"#E06E53\"]\n \n edge [dir = \"none\"]\n ala_counts->taxa [color = \"grey50\"]\n ala_counts->filters [color = \"#E06E53\"]\n ala_counts->locations [color = \"grey50\"]\n ala_counts->group_by [color = \"#E06E53\"]\n ala_species->taxa [color = \"grey50\"]\n ala_species->filters [color = \"grey50\"]\n ala_species->locations [color = \"grey50\"]\n ala_media->taxa [color = \"grey50\"]\n ala_media->filters [color = \"grey50\"]\n ala_media->locations [color = \"grey50\"]\n ala_media->fields [color = \"grey50\"]\n ala_occurrences->taxa [color = \"grey50\"]\n ala_occurrences->filters [color = \"grey50\"]\n ala_occurrences->locations [color = \"grey50\"]\n ala_occurrences->fields [color = \"grey50\"]\n ala_taxonomy->taxa [color = \"grey50\"]\n ala_taxonomy->down_to [color = \"grey50\"]\n taxa->select_taxa [color = \"grey50\"]\n filters->select_filters [color = \"#E06E53\"]\n locations->select_locations [color = \"grey50\"]\n group_by->select_fields [color = \"#E06E53\"]\n fields->select_fields [color = \"grey50\"]\n select_filters->\"...\" [color = \"#E06E53\"]\n select_filters->profile [color = \"grey50\"]\n select_fields->\"...\" [color = \"#E06E53\"]\n search_fields->find_field_values [color = \"grey50\"]\n \"...\"->search_fields [color = \"grey50\"]\n \"...\"->find_field_values [color = \"grey50\"]\n profile->find_profiles->find_profile_attributes [color = \"grey50\"]\n down_to->find_ranks [color = \"grey50\"]\n \n}\n","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script> </div> ```r ala_counts(filters = select_filters(year >= 2015), group_by = select_fields("cl22", "year", expand = TRUE)) %>% filter(count > 10^4) %>% ggplot(aes(x = year, y = cl22, fill = log(count))) + geom_tile() + theme_bw() ``` <!-- --> --- class: ALA-title-slide animated fadeIn layout: false .divider-text[<br><br><br>Future] <br> .white[Where next?] --- class: ALA-standard-slide animated fadeIn layout: true background-image: url(img/ALA_Logo_Inline_RGB.png) background-position: 90% 100% background-size: 20% --- .slide-title[Future]&nbsp;&nbsp;.slide-subtitle[galah] .pull-left[ <img class="logo" src="img/galah_logo_final_midres.png" width="90%"> ] .pull-right[ <br><br><br> .slide-title[Piping]<br> .slide-subtitle[`tidyverse` syntax for ALA queries]<br><br> ```r a_query_builder_function() %>% select_filters(year > 2010) %>% select_taxa("Heleioporus australiacus") %>% ala_counts() ``` ] --- .slide-title[Future]&nbsp;&nbsp;.slide-subtitle[upcoming projects] .pull-left[ <br><br><br> <img class="logo" src="img/ALA_Logo_Stacked_RGB.png" width="90%"> ] .pull-right[ <br><br><br> .slide-title[Import]<br> .slide-subtitle[fast upload of richer data types]<br><br> .slide-title[Cleaning]<br> .slide-subtitle[better detection & reporting of errors]<br><br> .slide-title[Support]<br> .slide-subtitle[code resources for researchers & analysts] ] --- <img src="img/ALA_labs_screenshot.png" width="95%"> .center[<em>labs.ala.org.au</em>] --- class: ALA-title-slide animated fadeIn layout: false <img class="logo" src="img/ALA_Logo_Stacked+Tagline_REV-RGB.png" width="40%" align="right"> .main-title[<br><br><br>Thank You]<br> .white[ <b>Martin Westgate</b><br> Team Leader | Science & Decision Support Team | Atlas of Living Australia<br><br> <b>t:</b> +61 422 522 494<br> <b>e:</b> martin.westgate@csiro.au <br> ] .small[ These slides were made with R v4.1.1 | rmarkdown | xaringan | ggplot2 | viridis | DiagrammeR ] <br> <br> <img class="logo" src="img/NCRIS_logo.png" width="10%" align="left"> <img class="logo" src="img/CSIRO_logo.png" width="10%" align="left"> <br> .small[The ALA is made possible by contributions from its many partners. It receives support through the Australian Government through the National Collaborative Research Infrastructure Strategy (NCRIS) and is hosted by CSIRO.]